Publications from the Ekeberg Lab

Articles

Kamali Sarvestani I., Lindahl M., Hellgren Kotaleski J. and Ekeberg Ö. (2011):

The arbitration-extension hypothesis: a hierarchical interpretation of the functional organization of the basal ganglia.

Front. Syst. Neurosci.: 5, 13

Harischandra N., Cabelguen J.-M. and Ekeberg Ö. (2010):

A 3D musculo-mechanical model of the salamander for the study of different gaits and modes of locomotion.

Front. Neurorobot.: 4, 112

Djurfeldt M., Hjorth J., Eppler J. M., Dudani N., Helias M., Potjans T. C., Bhalla U. S., Diesmann M., Kotaleski J. H. and Ekeberg Ö. (2010):

Run-time interoperability between neuronal network simulators based on the music framework.

Neuroinformatics: 8, 43-60

Chiel H. J., Ting L. H., Ekeberg Ö. and Hartmann M. J. (2009):

The brain in its body: Motor control and sensing in a biomechanical context.

J. Neurosci.: 29, 12807-12814

Kozlov A., Huss M., Lansner A., Hellgren Kotaleski J. and Grillner S. (2009):

Simple cellular and network control principles govern complex patterns of motor behavior.

PNAS: 106, 20027-20032

Harischandra N. and Ekeberg Ö. (2008):

System identification of muscle-joint interactions of the cat hind limb during locomotion.

Biol. Cybern.: 99, 125-138

Djurfeldt M., Ekeberg Ö. and Lansner A. (2008):

Large-scale modeling-a tool for conquering the complexity of the brain.

Front. Neuroinform.: 2

Djurfeldt M., Lundqvist M., Johansson C., Rehn M., Ekeberg Ö. and Lansner A. (2008):

Brain-scale simulation of the neocortex on the Blue Gene/L supercomputer.

IBM J Research and Development: 52, 31-42

Grillner S., Kozlov A., Dario P., Stefanini C., Menciassi A., Lansner A. and Kotaleski J. H. (2007):

Modeling a vertebrate locomotor system: pattern generation, steering, control of body orientation.

Progr Brain Res: 165, 221-233

Brette R., Rudolph M., Carnevale T., Hines M., Beeman D., Bower J. M., Diesmann M., Morrison A., Goodman P. H., Harris F. C., Jr., Zirpe M., Natschläger T., Pecevski D., Ermentrout B., Djurfeldt M., Lansner A., Rochel O., Vieville T., Muller E., Davison A. P., Boustani S. E. and Destexhe A. (2007):

Simulation of networks of spiking neurons: a review of tools and strategies..

J. Comp. Neurosci.: 23, 349-398, Online

Kozlov A. K., Lansner A., Hellgren Kotaleski J. and Grillner S. (2007):

A hemicord locomotor network of excitatory interneurons: a simulation study.

Biol Cybern: 96, 229-243

Johansson C., Ekeberg Ö. and Lansner A. (2006):

Clustering of stored memories in an attractor network with local competition.

Int. J. Neural Systems: 16, 393-403

Pearson K., Ekeberg Ö. and Büschges A. (2006):

Assessing sensory function in locomotor systems using neuro-mechanical simulations.

Trends in Neurosciences: 29, 625-631

Lundqvist M., Rehn M., Djurfeldt M. and Lansner A. (2006):

Attractor dynamics in a modular network model of the neocortex.

Network: Computation in Neural Systems: 17, 253-276

De Schutter E., Ekeberg Ö., Kotaleski J. H., Achard P. and Lansner A. (2005):

Biophysically detailed modelling of microcircuits and beyond.

Trends Neurosci.: 28, 562-569

Ekeberg Ö. and Pearson K. G. (2005):

Computer simulation of stepping in the hind legs of the cat: an examination of mechanisms regulating the stance-to-swing transition.

J. Neurophysiol.: 94, 4256-4268

Grillner S., Kozlov A. and Hellgren Kotaleski J. (2005):

Integrative neuroscience: linking levels of analyses.

Curr Opin Neurobiol: 15, 614-21

Conferences

Roos M., Yamamoto S.-I., Fransén E., Ekeberg Ö., Komeda T. and Tasuku M. (2006):

Modeling and controlling a gait training system utilizing a biarticular muscle model.

volume 2006 , pages 234-235.

Technical Reports

Ekeberg Ö. and Djurfeldt M. (2009):

Music - multi-simulation coordinator, users manual.

Technical report International Neuroinformatics Coordinating Facility (INCF).

Ekeberg Ö. and Djurfeldt M. (2008):

Music - multi-simulation coordinator: Request for comments.

Technical report International Neuroinformatics Coordinating Facility (INCF).

Djurfeldt M. and Lansner A. (2007):

Large-scale modeling of the nervous system.

Tech. rep. International Neuroinformatics Coordinating Facility (INCF).

Djurfeldt M., Johansson C., Ekeberg Ö., Rehn M., Lundqvist M. and Lansner A. (2005):

Massively parallel simulation of brain-scale neuronal network models.

Technical Report TRITA-NA-P0513 KTH, School of Computer Science and Communication Stockholm.

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