DD2436 Modeling of processes in cell biology

F/L

Content

Staff

F1

Course introduction

Modeling of biological processes in cells and multicellular systems, an overview. Introduction to modeling chemical reactions.

EF

F2

Enzyme kinetics, biochemical networks.

EF

F3

Enzyme kinetics, biochemical networks, cont.

EF

F4

Nernst-Planck and Goldmann-Hodgkin-Katz eqn,

non linear membranes, electrical equivalent circuits.

EF

F5

Voltage and ligand gated ion channels, Hodgkin-Huxley eqn, stochastic models

EF

L1

Biochemical networks

SA

F6

Passive and active electrical properties, cable equations, compartment models

EF

L1

Biochemical networks

SA

F7

Diffusion. Simplified neuron models.

EF

L2

Ion movement, cell membranes, ion channels

SA

F8

Genetic networks. Reverse engineering of biochemical networks.

EF

L2

Ion movement, cell membranes, ion channels

SA

L3

Diffusion + genetic networks

SA

L3

Diffusion + genetic networks

SA

T

Exam

EF

EF = Erik Fransén

SA = Sten Andersson


LAB1 1.5p Lab1, 2, 3

TEN2 4.5p Exam